Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PFDN1O60925 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PFDN1O60925 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.82■□□□□ 0.12
PFDN1O60925 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.82■□□□□ 0.12
PFDN1O60925 HSD17B1P1-201ENST00000590052 955 ntBASIC15.82■□□□□ 0.12
PFDN1O60925 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.82■□□□□ 0.12
PFDN1O60925 ST20-AS1-201ENST00000560255 4223 ntBASIC15.82■□□□□ 0.12
PFDN1O60925 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.82■□□□□ 0.12
PFDN1O60925 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.82■□□□□ 0.12
PFDN1O60925 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PFDN1O60925 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PFDN1O60925 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.81■□□□□ 0.12
PFDN1O60925 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PFDN1O60925 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.81■□□□□ 0.12
PFDN1O60925 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.81■□□□□ 0.12
PFDN1O60925 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.81■□□□□ 0.12
PFDN1O60925 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
PFDN1O60925 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.81■□□□□ 0.12
PFDN1O60925 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PFDN1O60925 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.81■□□□□ 0.12
PFDN1O60925 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PFDN1O60925 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.81■□□□□ 0.12
PFDN1O60925 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
PFDN1O60925 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PFDN1O60925 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
PFDN1O60925 AC079781.5-202ENST00000641784 3743 ntBASIC15.81■□□□□ 0.12
PFDN1O60925 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PFDN1O60925 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PFDN1O60925 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PFDN1O60925 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.8■□□□□ 0.12
PFDN1O60925 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PFDN1O60925 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PFDN1O60925 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PFDN1O60925 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.8■□□□□ 0.12
PFDN1O60925 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 AC015656.1-201ENST00000624209 3578 ntBASIC15.8■□□□□ 0.12
PFDN1O60925 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 AC133963.1-201ENST00000504166 1679 ntBASIC15.8■□□□□ 0.12
PFDN1O60925 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.8■□□□□ 0.12
PFDN1O60925 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PFDN1O60925 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PFDN1O60925 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.8■□□□□ 0.12
PFDN1O60925 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.8■□□□□ 0.12
PFDN1O60925 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 TSPY9P-201ENST00000440215 945 ntBASIC15.8■□□□□ 0.12
PFDN1O60925 TSPY11P-201ENST00000442607 1045 ntBASIC15.8■□□□□ 0.12
PFDN1O60925 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.8■□□□□ 0.12
PFDN1O60925 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.8■□□□□ 0.12
PFDN1O60925 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.8■□□□□ 0.12
PFDN1O60925 AL122018.1-201ENST00000446607 2310 ntBASIC15.8■□□□□ 0.12
PFDN1O60925 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PFDN1O60925 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PFDN1O60925 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PFDN1O60925 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.79■□□□□ 0.12
PFDN1O60925 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 AL137784.3-201ENST00000623858 2288 ntBASIC15.79■□□□□ 0.12
PFDN1O60925 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.79■□□□□ 0.12
PFDN1O60925 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PFDN1O60925 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms