Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC097374.2-201ENST00000618617 1306 ntBASIC21.84■■□□□ 1.09
SMARCA5O60264 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.84■■□□□ 1.09
SMARCA5O60264 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCA5O60264 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCA5O60264 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCA5O60264 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCA5O60264 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCA5O60264 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
SMARCA5O60264 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.84■■□□□ 1.09
SMARCA5O60264 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.84■■□□□ 1.09
SMARCA5O60264 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCA5O60264 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.84■■□□□ 1.09
SMARCA5O60264 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.84■■□□□ 1.09
SMARCA5O60264 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCA5O60264 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCA5O60264 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCA5O60264 BX276092.7-203ENST00000637198 1536 ntBASIC21.84■■□□□ 1.09
SMARCA5O60264 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCA5O60264 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCA5O60264 HLA-J-201ENST00000462773 1622 ntBASIC21.84■■□□□ 1.09
SMARCA5O60264 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.84■■□□□ 1.09
SMARCA5O60264 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMARCA5O60264 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.83■■□□□ 1.09
SMARCA5O60264 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCA5O60264 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.83■■□□□ 1.09
SMARCA5O60264 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCA5O60264 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCA5O60264 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCA5O60264 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCA5O60264 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SMARCA5O60264 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCA5O60264 IGHV3-47-201ENST00000425060 335 ntBASIC21.83■■□□□ 1.09
SMARCA5O60264 AC246785.2-201ENST00000432512 513 ntBASIC21.83■■□□□ 1.09
SMARCA5O60264 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCA5O60264 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMARCA5O60264 KRT17P6-201ENST00000453795 1220 ntBASIC21.83■■□□□ 1.09
SMARCA5O60264 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.83■■□□□ 1.09
SMARCA5O60264 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.83■■□□□ 1.09
SMARCA5O60264 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.83■■□□□ 1.09
SMARCA5O60264 AC074051.2-201ENST00000565115 352 ntBASIC21.83■■□□□ 1.09
SMARCA5O60264 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SMARCA5O60264 NSUN5P1-202ENST00000421140 1535 ntBASIC21.83■■□□□ 1.09
SMARCA5O60264 NSUN5P2-203ENST00000457352 1529 ntBASIC21.83■■□□□ 1.09
SMARCA5O60264 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.83■■□□□ 1.09
SMARCA5O60264 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCA5O60264 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCA5O60264 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.83■■□□□ 1.08
SMARCA5O60264 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.83■■□□□ 1.08
SMARCA5O60264 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
SMARCA5O60264 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMARCA5O60264 AC108860.2-201ENST00000562760 2183 ntBASIC21.82■■□□□ 1.08
SMARCA5O60264 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCA5O60264 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCA5O60264 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.82■■□□□ 1.08
SMARCA5O60264 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCA5O60264 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCA5O60264 COX5BP2-201ENST00000392354 334 ntBASIC21.82■■□□□ 1.08
SMARCA5O60264 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCA5O60264 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCA5O60264 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.82■■□□□ 1.08
SMARCA5O60264 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.82■■□□□ 1.08
SMARCA5O60264 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SMARCA5O60264 AC092329.2-201ENST00000598402 547 ntBASIC21.82■■□□□ 1.08
SMARCA5O60264 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.82■■□□□ 1.08
SMARCA5O60264 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.82■■□□□ 1.08
SMARCA5O60264 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCA5O60264 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMARCA5O60264 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SMARCA5O60264 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCA5O60264 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCA5O60264 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCA5O60264 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.81■■□□□ 1.08
SMARCA5O60264 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SMARCA5O60264 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCA5O60264 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCA5O60264 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SMARCA5O60264 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCA5O60264 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.81■■□□□ 1.08
SMARCA5O60264 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.81■■□□□ 1.08
SMARCA5O60264 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCA5O60264 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.81■■□□□ 1.08
SMARCA5O60264 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.81■■□□□ 1.08
SMARCA5O60264 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.81■■□□□ 1.08
SMARCA5O60264 BNIP3P18-201ENST00000593976 575 ntBASIC21.81■■□□□ 1.08
SMARCA5O60264 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.81■■□□□ 1.08
SMARCA5O60264 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCA5O60264 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SMARCA5O60264 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.81■■□□□ 1.08
SMARCA5O60264 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.81■■□□□ 1.08
SMARCA5O60264 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.81■■□□□ 1.08
SMARCA5O60264 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCA5O60264 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SMARCA5O60264 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.8■■□□□ 1.08
SMARCA5O60264 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCA5O60264 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCA5O60264 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCA5O60264 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCA5O60264 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCA5O60264 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCA5O60264 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms