Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH7O60245 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH7O60245 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCDH7O60245 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDH7O60245 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDH7O60245 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH7O60245 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDH7O60245 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 BX276092.7-203ENST00000637198 1536 ntBASIC16.93■□□□□ 0.3
PCDH7O60245 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH7O60245 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH7O60245 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH7O60245 AL645929.1-201ENST00000420084 975 ntBASIC16.93■□□□□ 0.3
PCDH7O60245 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH7O60245 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PCDH7O60245 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PCDH7O60245 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH7O60245 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDH7O60245 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDH7O60245 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
PCDH7O60245 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH7O60245 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDH7O60245 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCDH7O60245 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 AC106820.2-201ENST00000563775 3264 ntBASIC16.92■□□□□ 0.3
PCDH7O60245 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH7O60245 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH7O60245 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDH7O60245 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 AL023806.1-201ENST00000603994 1649 ntBASIC16.92■□□□□ 0.3
PCDH7O60245 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH7O60245 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH7O60245 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH7O60245 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH7O60245 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH7O60245 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH7O60245 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDH7O60245 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDH7O60245 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH7O60245 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PCDH7O60245 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH7O60245 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH7O60245 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH7O60245 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH7O60245 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH7O60245 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH7O60245 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH7O60245 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
PCDH7O60245 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH7O60245 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms