Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSSCA1O60232 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.47□□□□□ -0.09
SSSCA1O60232 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.47□□□□□ -0.09
SSSCA1O60232 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 AC133681.1-201ENST00000465482 601 ntBASIC14.47□□□□□ -0.09
SSSCA1O60232 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.47□□□□□ -0.09
SSSCA1O60232 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.47□□□□□ -0.09
SSSCA1O60232 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SSSCA1O60232 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SSSCA1O60232 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.47□□□□□ -0.09
SSSCA1O60232 HOXB1-202ENST00000577092 1414 ntBASIC14.47□□□□□ -0.09
SSSCA1O60232 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 DOC2GP-204ENST00000639052 2548 ntBASIC14.47□□□□□ -0.09
SSSCA1O60232 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SSSCA1O60232 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SSSCA1O60232 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.47□□□□□ -0.09
SSSCA1O60232 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SSSCA1O60232 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSSCA1O60232 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SSSCA1O60232 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.47□□□□□ -0.09
SSSCA1O60232 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SSSCA1O60232 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SSSCA1O60232 FLJ16779-201ENST00000612722 7638 ntBASIC14.46□□□□□ -0.09
SSSCA1O60232 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 AC022898.2-201ENST00000616822 1312 ntBASIC14.46□□□□□ -0.09
SSSCA1O60232 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.46□□□□□ -0.09
SSSCA1O60232 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SSSCA1O60232 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SSSCA1O60232 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.46□□□□□ -0.09
SSSCA1O60232 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.46□□□□□ -0.09
SSSCA1O60232 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
SSSCA1O60232 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SSSCA1O60232 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SSSCA1O60232 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SSSCA1O60232 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.46□□□□□ -0.09
SSSCA1O60232 RNA5SP413-201ENST00000516373 109 ntBASIC14.46□□□□□ -0.09
SSSCA1O60232 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.46□□□□□ -0.09
SSSCA1O60232 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 AP000692.2-201ENST00000608391 879 ntBASIC14.46□□□□□ -0.09
SSSCA1O60232 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SSSCA1O60232 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSSCA1O60232 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.46□□□□□ -0.09
SSSCA1O60232 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SSSCA1O60232 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SSSCA1O60232 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
SSSCA1O60232 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SSSCA1O60232 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SSSCA1O60232 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SSSCA1O60232 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SSSCA1O60232 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SSSCA1O60232 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
SSSCA1O60232 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
SSSCA1O60232 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.45□□□□□ -0.1
SSSCA1O60232 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms