Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.3□□□□□ -0.28
SNAI2O43623 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNAI2O43623 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.3□□□□□ -0.28
SNAI2O43623 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.29□□□□□ -0.28
SNAI2O43623 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
SNAI2O43623 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.29□□□□□ -0.28
SNAI2O43623 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNAI2O43623 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.29□□□□□ -0.28
SNAI2O43623 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.29□□□□□ -0.28
SNAI2O43623 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.29□□□□□ -0.28
SNAI2O43623 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.29□□□□□ -0.28
SNAI2O43623 AC011506.1-201ENST00000474329 610 ntBASIC13.29□□□□□ -0.28
SNAI2O43623 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.29□□□□□ -0.28
SNAI2O43623 MIR3180-5-201ENST00000583743 153 ntBASIC13.29□□□□□ -0.28
SNAI2O43623 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.29□□□□□ -0.28
SNAI2O43623 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.29□□□□□ -0.28
SNAI2O43623 AP000692.2-201ENST00000608391 879 ntBASIC13.29□□□□□ -0.28
SNAI2O43623 CR392000.1-201ENST00000624770 1228 ntBASIC13.29□□□□□ -0.28
SNAI2O43623 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.29□□□□□ -0.28
SNAI2O43623 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
SNAI2O43623 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SNAI2O43623 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SNAI2O43623 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.29□□□□□ -0.28
SNAI2O43623 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SNAI2O43623 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SNAI2O43623 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 AC036111.1-201ENST00000533973 1582 ntBASIC13.28□□□□□ -0.28
SNAI2O43623 AC103702.1-201ENST00000548801 2630 ntBASIC13.28□□□□□ -0.28
SNAI2O43623 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 AL138688.1-201ENST00000624851 1594 ntBASIC13.28□□□□□ -0.28
SNAI2O43623 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.28□□□□□ -0.28
SNAI2O43623 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.28□□□□□ -0.28
SNAI2O43623 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.28□□□□□ -0.28
SNAI2O43623 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SNAI2O43623 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SNAI2O43623 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 FLJ38576-201ENST00000623820 2459 ntBASIC13.28□□□□□ -0.28
SNAI2O43623 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.28□□□□□ -0.28
SNAI2O43623 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SNAI2O43623 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SNAI2O43623 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 AC092850.2-201ENST00000623821 2697 ntBASIC13.28□□□□□ -0.28
SNAI2O43623 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
SNAI2O43623 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 PCDHA1-201ENST00000378133 2726 ntBASIC13.28□□□□□ -0.28
SNAI2O43623 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNAI2O43623 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms