Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 BCAR1-209ENST00000546196 1340 ntBASIC16.6■□□□□ 0.25
RRP8O43159 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.6■□□□□ 0.25
RRP8O43159 NCF1C-201ENST00000438382 1427 ntBASIC16.6■□□□□ 0.25
RRP8O43159 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RRP8O43159 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
RRP8O43159 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.6■□□□□ 0.25
RRP8O43159 AC006504.4-201ENST00000592118 1568 ntBASIC16.6■□□□□ 0.25
RRP8O43159 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RRP8O43159 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RRP8O43159 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RRP8O43159 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RRP8O43159 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RRP8O43159 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 AL139400.1-201ENST00000366220 510 ntBASIC16.59■□□□□ 0.25
RRP8O43159 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.59■□□□□ 0.25
RRP8O43159 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 AC069262.1-201ENST00000539058 672 ntBASIC16.59■□□□□ 0.25
RRP8O43159 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.59■□□□□ 0.25
RRP8O43159 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.59■□□□□ 0.25
RRP8O43159 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
RRP8O43159 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.59■□□□□ 0.25
RRP8O43159 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.59■□□□□ 0.25
RRP8O43159 AL035252.4-201ENST00000624174 288 ntBASIC16.59■□□□□ 0.25
RRP8O43159 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.59■□□□□ 0.25
RRP8O43159 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RRP8O43159 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RRP8O43159 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RRP8O43159 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.59■□□□□ 0.25
RRP8O43159 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RRP8O43159 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RRP8O43159 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RRP8O43159 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.25
RRP8O43159 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RRP8O43159 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
RRP8O43159 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.58■□□□□ 0.25
RRP8O43159 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RRP8O43159 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RRP8O43159 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
RRP8O43159 MRPL20P1-201ENST00000400819 433 ntBASIC16.58■□□□□ 0.24
RRP8O43159 DDX43P3-201ENST00000441064 443 ntBASIC16.58■□□□□ 0.24
RRP8O43159 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.58■□□□□ 0.24
RRP8O43159 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RRP8O43159 AC074386.1-202ENST00000463561 864 ntBASIC16.58■□□□□ 0.24
RRP8O43159 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.58■□□□□ 0.24
RRP8O43159 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.58■□□□□ 0.24
RRP8O43159 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RRP8O43159 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.58■□□□□ 0.24
RRP8O43159 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.58■□□□□ 0.24
RRP8O43159 AC073592.5-201ENST00000624854 528 ntBASIC16.58■□□□□ 0.24
RRP8O43159 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.58■□□□□ 0.24
RRP8O43159 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.58■□□□□ 0.24
RRP8O43159 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.58■□□□□ 0.24
RRP8O43159 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RRP8O43159 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RRP8O43159 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RRP8O43159 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RRP8O43159 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RRP8O43159 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RRP8O43159 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.58■□□□□ 0.24
RRP8O43159 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.58■□□□□ 0.24
RRP8O43159 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.58■□□□□ 0.24
RRP8O43159 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RRP8O43159 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
RRP8O43159 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RRP8O43159 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RRP8O43159 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.58■□□□□ 0.24
RRP8O43159 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RRP8O43159 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RRP8O43159 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
RRP8O43159 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
RRP8O43159 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RRP8O43159 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.57■□□□□ 0.24
RRP8O43159 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.57■□□□□ 0.24
RRP8O43159 PMS2P4-201ENST00000412466 1052 ntBASIC16.57■□□□□ 0.24
RRP8O43159 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.57■□□□□ 0.24
RRP8O43159 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.57■□□□□ 0.24
RRP8O43159 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.57■□□□□ 0.24
RRP8O43159 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RRP8O43159 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms