Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDH17O14917 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 AC004870.1-201ENST00000315132 882 ntBASIC16.92■□□□□ 0.3
PCDH17O14917 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDH17O14917 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PCDH17O14917 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDH17O14917 KRT16P4-201ENST00000453883 522 ntBASIC16.92■□□□□ 0.3
PCDH17O14917 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH17O14917 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDH17O14917 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDH17O14917 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDH17O14917 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDH17O14917 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDH17O14917 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH17O14917 AC091304.2-201ENST00000564639 760 ntBASIC16.92■□□□□ 0.3
PCDH17O14917 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PCDH17O14917 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH17O14917 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDH17O14917 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH17O14917 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH17O14917 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.92■□□□□ 0.3
PCDH17O14917 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDH17O14917 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH17O14917 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDH17O14917 PHGDH-209ENST00000641074 1780 ntBASIC16.92■□□□□ 0.3
PCDH17O14917 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH17O14917 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDH17O14917 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDH17O14917 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH17O14917 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH17O14917 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
PCDH17O14917 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH17O14917 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDH17O14917 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDH17O14917 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH17O14917 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH17O14917 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDH17O14917 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH17O14917 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDH17O14917 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH17O14917 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PCDH17O14917 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH17O14917 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH17O14917 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH17O14917 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH17O14917 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PCDH17O14917 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH17O14917 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDH17O14917 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH17O14917 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PCDH17O14917 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDH17O14917 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH17O14917 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH17O14917 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
PCDH17O14917 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH17O14917 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH17O14917 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms