Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NDUFA4O00483 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NDUFA4O00483 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 KRT18P1-202ENST00000452408 1331 ntBASIC13.6□□□□□ -0.23
NDUFA4O00483 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NDUFA4O00483 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 AL138688.1-201ENST00000624851 1594 ntBASIC13.59□□□□□ -0.23
NDUFA4O00483 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 AC125634.1-201ENST00000438758 1403 ntBASIC13.59□□□□□ -0.23
NDUFA4O00483 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NDUFA4O00483 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
NDUFA4O00483 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.59□□□□□ -0.23
NDUFA4O00483 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
NDUFA4O00483 COX5BP2-201ENST00000392354 334 ntBASIC13.59□□□□□ -0.23
NDUFA4O00483 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
NDUFA4O00483 MIR1224-201ENST00000408193 85 ntBASIC13.59□□□□□ -0.23
NDUFA4O00483 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 AC005104.2-201ENST00000427818 678 ntBASIC13.59□□□□□ -0.23
NDUFA4O00483 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.59□□□□□ -0.23
NDUFA4O00483 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.59□□□□□ -0.23
NDUFA4O00483 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NDUFA4O00483 Z69720.1-201ENST00000601483 472 ntBASIC13.59□□□□□ -0.23
NDUFA4O00483 AC010331.1-201ENST00000611423 582 ntBASIC13.59□□□□□ -0.23
NDUFA4O00483 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.59□□□□□ -0.23
NDUFA4O00483 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NDUFA4O00483 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NDUFA4O00483 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.58□□□□□ -0.23
NDUFA4O00483 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.58□□□□□ -0.23
NDUFA4O00483 REXO1L11P-201ENST00000620964 1927 ntBASIC13.58□□□□□ -0.23
NDUFA4O00483 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NDUFA4O00483 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.58□□□□□ -0.23
NDUFA4O00483 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
NDUFA4O00483 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.58□□□□□ -0.24
NDUFA4O00483 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.58□□□□□ -0.24
NDUFA4O00483 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
NDUFA4O00483 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 DRAXINP1-201ENST00000437611 948 ntBASIC13.58□□□□□ -0.24
NDUFA4O00483 AC002558.1-201ENST00000488906 803 ntBASIC13.58□□□□□ -0.24
NDUFA4O00483 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.58□□□□□ -0.24
NDUFA4O00483 AC009533.2-201ENST00000543664 586 ntBASIC13.58□□□□□ -0.24
NDUFA4O00483 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.58□□□□□ -0.24
NDUFA4O00483 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.58□□□□□ -0.24
NDUFA4O00483 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 AL445228.2-201ENST00000605589 952 ntBASIC13.58□□□□□ -0.24
NDUFA4O00483 AL138831.2-201ENST00000606564 490 ntBASIC13.58□□□□□ -0.24
NDUFA4O00483 AC069148.1-201ENST00000608741 768 ntBASIC13.58□□□□□ -0.24
NDUFA4O00483 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.58□□□□□ -0.24
NDUFA4O00483 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.58□□□□□ -0.24
NDUFA4O00483 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
NDUFA4O00483 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
NDUFA4O00483 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NDUFA4O00483 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.58□□□□□ -0.24
NDUFA4O00483 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.58□□□□□ -0.24
NDUFA4O00483 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NDUFA4O00483 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.58□□□□□ -0.24
NDUFA4O00483 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms