Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC7O00311 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.38■□□□□ 0.37
CDC7O00311 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CDC7O00311 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.38■□□□□ 0.37
CDC7O00311 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.38■□□□□ 0.37
CDC7O00311 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC7O00311 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CDC7O00311 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.38■□□□□ 0.37
CDC7O00311 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.38■□□□□ 0.37
CDC7O00311 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDC7O00311 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CDC7O00311 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC7O00311 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDC7O00311 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC7O00311 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDC7O00311 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC7O00311 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDC7O00311 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC7O00311 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.38■□□□□ 0.37
CDC7O00311 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.38■□□□□ 0.37
CDC7O00311 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDC7O00311 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.37■□□□□ 0.37
CDC7O00311 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CDC7O00311 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.37■□□□□ 0.37
CDC7O00311 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 TSPY22P-201ENST00000427496 604 ntBASIC17.37■□□□□ 0.37
CDC7O00311 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.37■□□□□ 0.37
CDC7O00311 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC7O00311 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.37■□□□□ 0.37
CDC7O00311 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDC7O00311 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDC7O00311 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDC7O00311 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.37■□□□□ 0.37
CDC7O00311 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CDC7O00311 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC7O00311 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDC7O00311 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC7O00311 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC7O00311 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CDC7O00311 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.36■□□□□ 0.37
CDC7O00311 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.36■□□□□ 0.37
CDC7O00311 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDC7O00311 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.36■□□□□ 0.37
CDC7O00311 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.36■□□□□ 0.37
CDC7O00311 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDC7O00311 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.36■□□□□ 0.37
CDC7O00311 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDC7O00311 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.36■□□□□ 0.37
CDC7O00311 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.36■□□□□ 0.37
CDC7O00311 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.36■□□□□ 0.37
CDC7O00311 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.36■□□□□ 0.37
CDC7O00311 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CDC7O00311 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDC7O00311 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.36■□□□□ 0.37
CDC7O00311 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDC7O00311 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CDC7O00311 AC010460.3-201ENST00000511359 1579 ntBASIC17.36■□□□□ 0.37
CDC7O00311 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.36■□□□□ 0.37
CDC7O00311 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC7O00311 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC7O00311 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC7O00311 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC7O00311 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.35■□□□□ 0.37
CDC7O00311 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC7O00311 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CDC7O00311 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC7O00311 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC7O00311 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDC7O00311 AL031133.1-201ENST00000406807 723 ntBASIC17.35■□□□□ 0.37
CDC7O00311 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC7O00311 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC7O00311 AC096633.1-201ENST00000422446 749 ntBASIC17.35■□□□□ 0.37
CDC7O00311 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms