Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 TSSC2-201ENST00000450217 709 ntBASIC15.65■□□□□ 0.1
NPIPB4C9JG80 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 AC111152.3-201ENST00000569699 673 ntBASIC15.65■□□□□ 0.1
NPIPB4C9JG80 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 AC011467.2-201ENST00000598425 242 ntBASIC15.65■□□□□ 0.1
NPIPB4C9JG80 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB4C9JG80 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
NPIPB4C9JG80 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
NPIPB4C9JG80 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 PCED1CP-201ENST00000419887 785 ntBASIC15.64■□□□□ 0.09
NPIPB4C9JG80 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.64■□□□□ 0.09
NPIPB4C9JG80 HCG11-201ENST00000411553 5696 ntBASIC15.64■□□□□ 0.09
NPIPB4C9JG80 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 AL353593.2-201ENST00000602529 1483 ntBASIC15.64■□□□□ 0.09
NPIPB4C9JG80 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB4C9JG80 IER3-202ENST00000376377 1350 ntBASIC15.63■□□□□ 0.09
NPIPB4C9JG80 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 AC090340.1-201ENST00000620778 4980 ntBASIC15.63■□□□□ 0.09
NPIPB4C9JG80 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 AC087388.1-201ENST00000571370 1112 ntBASIC15.63■□□□□ 0.09
NPIPB4C9JG80 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 AC109462.3-201ENST00000573934 613 ntBASIC15.63■□□□□ 0.09
NPIPB4C9JG80 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 Z69720.1-201ENST00000601483 472 ntBASIC15.63■□□□□ 0.09
NPIPB4C9JG80 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NPIPB4C9JG80 AP000550.4-202ENST00000639755 178 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms