Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC20.08■□□□□ 0.81
SPDYE4A6NLX3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
SPDYE4A6NLX3 AC034232.1-201ENST00000506026 1064 ntBASIC20.08■□□□□ 0.81
SPDYE4A6NLX3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.08■□□□□ 0.81
SPDYE4A6NLX3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.08■□□□□ 0.81
SPDYE4A6NLX3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPDYE4A6NLX3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 SPDYE15P-201ENST00000424157 909 ntBASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 AC007041.1-201ENST00000438989 1155 ntBASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 AC012313.10-201ENST00000623509 926 ntBASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SPDYE4A6NLX3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 AL049829.1-201ENST00000465411 156 ntBASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 PRELID1P1-202ENST00000567272 903 ntBASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 AC144521.1-201ENST00000607148 956 ntBASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 AC048344.4-201ENST00000619744 527 ntBASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.06■□□□□ 0.8
SPDYE4A6NLX3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SPDYE4A6NLX3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms