Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC196A0A1B0GTZ2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CCDC196A0A1B0GTZ2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC196A0A1B0GTZ2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC196A0A1B0GTZ2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC196A0A1B0GTZ2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC196A0A1B0GTZ2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 LINC00896-202ENST00000609602 2128 ntBASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 NSUN5P1-202ENST00000421140 1535 ntBASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 NSUN5P2-203ENST00000457352 1529 ntBASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC196A0A1B0GTZ2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 LTB4R2-202ENST00000528054 3092 ntBASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 AC103564.2-201ENST00000432853 1299 ntBASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 AC074051.2-201ENST00000565115 352 ntBASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 AC011467.2-201ENST00000598425 242 ntBASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
CCDC196A0A1B0GTZ2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 POM121L3P-201ENST00000419331 1163 ntBASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 AC002558.1-201ENST00000488906 803 ntBASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC196A0A1B0GTZ2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC196A0A1B0GTZ2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
CCDC196A0A1B0GTZ2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC196A0A1B0GTZ2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 TP73-AS1-210ENST00000637775 1455 ntBASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC196A0A1B0GTZ2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms