Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3EA0A087X179 AL138781.2-201ENST00000617896 1843 ntBASIC17.61■□□□□ 0.41
TBC1D3EA0A087X179 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3EA0A087X179 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 AL020989.1-201ENST00000422979 469 ntBASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 Z83851.2-201ENST00000609564 659 ntBASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 AC027601.4-201ENST00000611259 610 ntBASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 MIR1199-201ENST00000621445 119 ntBASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 AC073592.4-201ENST00000623827 446 ntBASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 SIGLEC16-201ENST00000599858 1437 ntBASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TBC1D3EA0A087X179 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 AL049757.1-201ENST00000616842 1596 ntBASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 AP000997.3-201ENST00000623333 2250 ntBASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TBC1D3EA0A087X179 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TBC1D3EA0A087X179 AC009949.1-201ENST00000623048 1830 ntBASIC17.58■□□□□ 0.41
TBC1D3EA0A087X179 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.58■□□□□ 0.41
TBC1D3EA0A087X179 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.58■□□□□ 0.41
TBC1D3EA0A087X179 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
TBC1D3EA0A087X179 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TBC1D3EA0A087X179 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TBC1D3EA0A087X179 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TBC1D3EA0A087X179 AL353593.2-201ENST00000602529 1483 ntBASIC17.58■□□□□ 0.41
TBC1D3EA0A087X179 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TBC1D3EA0A087X179 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 UNC93B6-202ENST00000528242 690 ntBASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 AC034105.1-201ENST00000563488 319 ntBASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 AC006557.2-201ENST00000592985 1240 ntBASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TBC1D3EA0A087X179 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms