Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.33■□□□□ 0.36
CSNK1G3Q9Y6M4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 KRT8P47-201ENST00000604727 1398 ntBASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 BX842568.4-201ENST00000421222 227 ntBASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1G3Q9Y6M4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 PGAM5P1-201ENST00000518923 814 ntBASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 PGM5P2-202ENST00000637225 1043 ntBASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
CSNK1G3Q9Y6M4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 MIR1233-2-201ENST00000408138 82 ntBASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 MIR1233-1-201ENST00000408722 82 ntBASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 MED15P5-201ENST00000423150 992 ntBASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 AC006557.2-201ENST00000592985 1240 ntBASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 AC140113.2-201ENST00000604370 208 ntBASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSNK1G3Q9Y6M4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms