Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC6Q9Y625 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC6Q9Y625 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC6Q9Y625 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 AC073508.3-201ENST00000619697 1419 ntBASIC16.82■□□□□ 0.28
GPC6Q9Y625 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.82■□□□□ 0.28
GPC6Q9Y625 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC6Q9Y625 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GPC6Q9Y625 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 BX664615.1-201ENST00000443558 458 ntBASIC16.81■□□□□ 0.28
GPC6Q9Y625 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 DUTP2-201ENST00000519164 463 ntBASIC16.81■□□□□ 0.28
GPC6Q9Y625 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
GPC6Q9Y625 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC6Q9Y625 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 COX11P1-201ENST00000489116 835 ntBASIC16.8■□□□□ 0.28
GPC6Q9Y625 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 AC092865.7-201ENST00000641832 219 ntBASIC16.8■□□□□ 0.28
GPC6Q9Y625 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
GPC6Q9Y625 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC6Q9Y625 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms