Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 AC135050.7-201ENST00000624508 2218 ntBASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 AC009947.1-201ENST00000444350 727 ntBASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.52■□□□□ 0.39
SNX11Q9Y5W9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 AC018470.1-201ENST00000624790 3129 ntBASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 DNAJB3-201ENST00000446806 729 ntBASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 AL022326.1-202ENST00000641533 845 ntBASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNX11Q9Y5W9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 AC004817.3-201ENST00000602957 2129 ntBASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 PMPCAP1-201ENST00000508114 1576 ntBASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNX11Q9Y5W9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms