Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGC4Q9Y5F7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGC4Q9Y5F7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGC4Q9Y5F7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGC4Q9Y5F7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGC4Q9Y5F7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 COX5BP2-201ENST00000392354 334 ntBASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 TSPY19P-201ENST00000418461 509 ntBASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 TSPY18P-201ENST00000441642 509 ntBASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 KRT16P4-201ENST00000453883 522 ntBASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 KRT18P31-201ENST00000506277 1292 ntBASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 AL121772.3-201ENST00000610840 674 ntBASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 AC114341.1-201ENST00000618070 349 ntBASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGC4Q9Y5F7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 BX276092.7-203ENST00000637198 1536 ntBASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 INTS4P1-201ENST00000438455 1935 ntBASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 FAM220CP-201ENST00000395253 831 ntBASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 AC091304.2-201ENST00000564639 760 ntBASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGC4Q9Y5F7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 SIRPAP1-201ENST00000448467 1770 ntBASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 AL591684.3-201ENST00000605187 298 ntBASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 REXO1L11P-201ENST00000620964 1927 ntBASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 FZD10-202ENST00000539839 3282 ntBASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGC4Q9Y5F7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGC4Q9Y5F7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms