Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 NUS1P2-201ENST00000417358 873 ntBASIC18.65■□□□□ 0.58
SMG5Q9UPR3 AL031284.1-201ENST00000419297 478 ntBASIC18.65■□□□□ 0.58
SMG5Q9UPR3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 IGHV3-47-201ENST00000425060 335 ntBASIC18.65■□□□□ 0.58
SMG5Q9UPR3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 HMGN1P19-201ENST00000436976 333 ntBASIC18.65■□□□□ 0.58
SMG5Q9UPR3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.65■□□□□ 0.58
SMG5Q9UPR3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.65■□□□□ 0.58
SMG5Q9UPR3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.65■□□□□ 0.58
SMG5Q9UPR3 FLJ13224-201ENST00000313737 1514 ntBASIC18.64■□□□□ 0.58
SMG5Q9UPR3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMG5Q9UPR3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SMG5Q9UPR3 AC008556.1-201ENST00000610908 2040 ntBASIC18.64■□□□□ 0.58
SMG5Q9UPR3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 FAM197Y8-203ENST00000450145 560 ntBASIC18.64■□□□□ 0.57
SMG5Q9UPR3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 AC093909.1-201ENST00000504731 1122 ntBASIC18.64■□□□□ 0.57
SMG5Q9UPR3 AC106730.1-201ENST00000566722 1090 ntBASIC18.64■□□□□ 0.57
SMG5Q9UPR3 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 AL390719.2-201ENST00000606993 987 ntBASIC18.64■□□□□ 0.57
SMG5Q9UPR3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMG5Q9UPR3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 KRT18P67-201ENST00000432816 1264 ntBASIC18.63■□□□□ 0.57
SMG5Q9UPR3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 AP003733.1-201ENST00000491725 852 ntBASIC18.63■□□□□ 0.57
SMG5Q9UPR3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.63■□□□□ 0.57
SMG5Q9UPR3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 AC012317.2-201ENST00000623305 2251 ntBASIC18.63■□□□□ 0.57
SMG5Q9UPR3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMG5Q9UPR3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMG5Q9UPR3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMG5Q9UPR3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMG5Q9UPR3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMG5Q9UPR3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMG5Q9UPR3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMG5Q9UPR3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMG5Q9UPR3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms