Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PNMA3Q9UL41 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PNMA3Q9UL41 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.33■□□□□ 0.84
PNMA3Q9UL41 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PNMA3Q9UL41 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PNMA3Q9UL41 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.33■□□□□ 0.84
PNMA3Q9UL41 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PNMA3Q9UL41 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 AL645939.2-201ENST00000427340 991 ntBASIC20.31■□□□□ 0.84
PNMA3Q9UL41 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 CEND1P1-201ENST00000451006 455 ntBASIC20.31■□□□□ 0.84
PNMA3Q9UL41 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 AC126763.1-201ENST00000552015 2118 ntBASIC20.31■□□□□ 0.84
PNMA3Q9UL41 AP002472.1-201ENST00000577490 586 ntBASIC20.31■□□□□ 0.84
PNMA3Q9UL41 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PNMA3Q9UL41 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 MIR3197-201ENST00000582241 73 ntBASIC20.3■□□□□ 0.84
PNMA3Q9UL41 AC116407.2-201ENST00000613639 860 ntBASIC20.3■□□□□ 0.84
PNMA3Q9UL41 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PNMA3Q9UL41 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms