Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 RPSAP43-201ENST00000402237 625 ntBASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 AC004967.1-201ENST00000453589 447 ntBASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 AC055717.3-201ENST00000622967 595 ntBASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42EP3Q9UKI2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 TEX21P-204ENST00000641479 1693 ntBASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 FEM1AP3-201ENST00000403722 1741 ntBASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 KRT18P3-201ENST00000451602 1288 ntBASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 AC113404.2-201ENST00000507884 177 ntBASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 AC027796.2-201ENST00000575326 344 ntBASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 LINC02084-201ENST00000606069 1096 ntBASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42EP3Q9UKI2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms