Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 AC018712.1-201ENST00000455767 687 ntBASIC16.67■□□□□ 0.26
CTSFQ9UBX1 AC122714.2-201ENST00000502787 707 ntBASIC16.67■□□□□ 0.26
CTSFQ9UBX1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 AP001005.1-201ENST00000571755 1248 ntBASIC16.67■□□□□ 0.26
CTSFQ9UBX1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTSFQ9UBX1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 AL356309.3-201ENST00000624132 1934 ntBASIC16.66■□□□□ 0.26
CTSFQ9UBX1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 COX5BP2-201ENST00000392354 334 ntBASIC16.66■□□□□ 0.26
CTSFQ9UBX1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 AL031284.1-201ENST00000419297 478 ntBASIC16.66■□□□□ 0.26
CTSFQ9UBX1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 AP000867.4-201ENST00000641616 219 ntBASIC16.66■□□□□ 0.26
CTSFQ9UBX1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSFQ9UBX1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 AL022342.1-201ENST00000400363 863 ntBASIC16.65■□□□□ 0.26
CTSFQ9UBX1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 AC021087.4-201ENST00000563761 564 ntBASIC16.65■□□□□ 0.26
CTSFQ9UBX1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.65■□□□□ 0.26
CTSFQ9UBX1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSFQ9UBX1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.64■□□□□ 0.26
CTSFQ9UBX1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms