Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 AC021087.4-201ENST00000563761 564 ntBASIC16.26■□□□□ 0.19
LRFN1Q9P244 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 AP000867.4-201ENST00000641616 219 ntBASIC16.26■□□□□ 0.19
LRFN1Q9P244 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.26■□□□□ 0.19
LRFN1Q9P244 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRFN1Q9P244 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
LRFN1Q9P244 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 AC103564.2-201ENST00000432853 1299 ntBASIC16.25■□□□□ 0.19
LRFN1Q9P244 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 AC116407.2-201ENST00000613639 860 ntBASIC16.25■□□□□ 0.19
LRFN1Q9P244 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 REXO1L9P-201ENST00000604264 2108 ntBASIC16.25■□□□□ 0.19
LRFN1Q9P244 AC090164.3-201ENST00000610780 2143 ntBASIC16.25■□□□□ 0.19
LRFN1Q9P244 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRFN1Q9P244 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.25■□□□□ 0.19
LRFN1Q9P244 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 COX5BP2-201ENST00000392354 334 ntBASIC16.24■□□□□ 0.19
LRFN1Q9P244 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 HNRNPDP1-201ENST00000439535 754 ntBASIC16.24■□□□□ 0.19
LRFN1Q9P244 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 NKAPP1-205ENST00000585790 367 ntBASIC16.24■□□□□ 0.19
LRFN1Q9P244 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 FAM215A-202ENST00000632077 792 ntBASIC16.24■□□□□ 0.19
LRFN1Q9P244 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LRFN1Q9P244 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRFN1Q9P244 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms