Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
VAPAQ9P0L0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VAPAQ9P0L0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
VAPAQ9P0L0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VAPAQ9P0L0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.77■□□□□ 0.27
VAPAQ9P0L0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 LYSMD4-203ENST00000378904 2122 ntBASIC16.76■□□□□ 0.27
VAPAQ9P0L0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 KRT89P-201ENST00000620027 1478 ntBASIC16.76■□□□□ 0.27
VAPAQ9P0L0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.76■□□□□ 0.27
VAPAQ9P0L0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 AC024563.2-201ENST00000603282 481 ntBASIC16.76■□□□□ 0.27
VAPAQ9P0L0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPAQ9P0L0 AC060834.1-201ENST00000443027 2032 ntBASIC16.75■□□□□ 0.27
VAPAQ9P0L0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 AGGF1P2-201ENST00000426656 2106 ntBASIC16.75■□□□□ 0.27
VAPAQ9P0L0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 MMP23A-201ENST00000234610 1017 ntBASIC16.75■□□□□ 0.27
VAPAQ9P0L0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VAPAQ9P0L0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 AP000523.1-201ENST00000398242 1049 ntBASIC16.74■□□□□ 0.27
VAPAQ9P0L0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 GCSHP2-201ENST00000560971 527 ntBASIC16.74■□□□□ 0.27
VAPAQ9P0L0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 UBALD1-205ENST00000590891 2641 ntBASIC16.74■□□□□ 0.27
VAPAQ9P0L0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPAQ9P0L0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
VAPAQ9P0L0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.73■□□□□ 0.27
VAPAQ9P0L0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VAPAQ9P0L0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VAPAQ9P0L0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAPAQ9P0L0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms