Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 AC023274.1-201ENST00000418278 595 ntBASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 RNA5SP416-201ENST00000516838 111 ntBASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO28Q9NVF7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 YBX2P1-201ENST00000394192 760 ntBASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 SIGLEC30P-201ENST00000455569 941 ntBASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 AC064836.3-201ENST00000607928 673 ntBASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
FBXO28Q9NVF7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 RPSAP43-201ENST00000402237 625 ntBASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 UPF3AP3-201ENST00000420996 769 ntBASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 PGM5P2-202ENST00000637225 1043 ntBASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO28Q9NVF7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 NCF1C-201ENST00000438382 1427 ntBASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
FBXO28Q9NVF7 GPX1P2-201ENST00000429271 606 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms