Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CISHQ9NSE2 LINC01451-201ENST00000623792 534 ntBASIC18.9■□□□□ 0.62
CISHQ9NSE2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CISHQ9NSE2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CISHQ9NSE2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CISHQ9NSE2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CISHQ9NSE2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CISHQ9NSE2 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.89■□□□□ 0.62
CISHQ9NSE2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CISHQ9NSE2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CISHQ9NSE2 AC133963.1-201ENST00000504166 1679 ntBASIC18.89■□□□□ 0.61
CISHQ9NSE2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CISHQ9NSE2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.89■□□□□ 0.61
CISHQ9NSE2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CISHQ9NSE2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CISHQ9NSE2 RCN1P2-201ENST00000398357 915 ntBASIC18.89■□□□□ 0.61
CISHQ9NSE2 POM121L3P-201ENST00000419331 1163 ntBASIC18.89■□□□□ 0.61
CISHQ9NSE2 AC122714.2-201ENST00000502787 707 ntBASIC18.89■□□□□ 0.61
CISHQ9NSE2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.89■□□□□ 0.61
CISHQ9NSE2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.89■□□□□ 0.61
CISHQ9NSE2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.89■□□□□ 0.61
CISHQ9NSE2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CISHQ9NSE2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CISHQ9NSE2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CISHQ9NSE2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CISHQ9NSE2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CISHQ9NSE2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CISHQ9NSE2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CISHQ9NSE2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.89■□□□□ 0.61
CISHQ9NSE2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.88■□□□□ 0.61
CISHQ9NSE2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.88■□□□□ 0.61
CISHQ9NSE2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.88■□□□□ 0.61
CISHQ9NSE2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CISHQ9NSE2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 AC005104.2-201ENST00000427818 678 ntBASIC18.88■□□□□ 0.61
CISHQ9NSE2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.88■□□□□ 0.61
CISHQ9NSE2 AC138894.3-201ENST00000603787 634 ntBASIC18.88■□□□□ 0.61
CISHQ9NSE2 AC114341.1-201ENST00000618070 349 ntBASIC18.88■□□□□ 0.61
CISHQ9NSE2 HLA-J-201ENST00000462773 1622 ntBASIC18.88■□□□□ 0.61
CISHQ9NSE2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.88■□□□□ 0.61
CISHQ9NSE2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.88■□□□□ 0.61
CISHQ9NSE2 SIRPAP1-201ENST00000448467 1770 ntBASIC18.88■□□□□ 0.61
CISHQ9NSE2 INTS4P1-201ENST00000438455 1935 ntBASIC18.88■□□□□ 0.61
CISHQ9NSE2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CISHQ9NSE2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 NUS1P1-201ENST00000446295 882 ntBASIC18.87■□□□□ 0.61
CISHQ9NSE2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 FOSL1P1-201ENST00000511041 816 ntBASIC18.87■□□□□ 0.61
CISHQ9NSE2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.87■□□□□ 0.61
CISHQ9NSE2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CISHQ9NSE2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CISHQ9NSE2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms