Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC42SE2Q9NRR3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CDC42SE2Q9NRR3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CDC42SE2Q9NRR3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC42SE2Q9NRR3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC42SE2Q9NRR3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 AC016396.2-201ENST00000562575 1417 ntBASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 INGX-201ENST00000359239 846 ntBASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDC42SE2Q9NRR3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 KRT17P2-201ENST00000300992 1314 ntBASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 AP000523.1-201ENST00000398242 1049 ntBASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 AC008550.1-201ENST00000511500 884 ntBASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
CDC42SE2Q9NRR3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms