Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 SLC14A1-205ENST00000502059 2371 ntTSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RTN4Q9NQC3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 TUBB8P6-201ENST00000436895 1288 ntBASIC20.96■□□□□ 0.95
RTN4Q9NQC3 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.96■□□□□ 0.95
RTN4Q9NQC3 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 PNMA6B-201ENST00000538162 1200 ntBASIC20.96■□□□□ 0.95
RTN4Q9NQC3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 AL121829.2-201ENST00000620908 328 ntBASIC20.96■□□□□ 0.95
RTN4Q9NQC3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RTN4Q9NQC3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RTN4Q9NQC3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 TSPY6P-201ENST00000448518 926 ntBASIC20.95■□□□□ 0.94
RTN4Q9NQC3 AC097658.1-201ENST00000475555 843 ntBASIC20.95■□□□□ 0.94
RTN4Q9NQC3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 REXO1L9P-201ENST00000604264 2108 ntBASIC20.95■□□□□ 0.94
RTN4Q9NQC3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTN4Q9NQC3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTN4Q9NQC3 AC006970.2-201ENST00000450065 779 ntBASIC20.94■□□□□ 0.94
RTN4Q9NQC3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms