Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 AL121912.1-201ENST00000603683 238 ntBASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.55■□□□□ 0.88
VAT1LQ9HCJ6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 AC009078.2-202ENST00000463353 338 ntBASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 MTDHP3-201ENST00000594186 672 ntBASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 AC116407.2-201ENST00000613639 860 ntBASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VAT1LQ9HCJ6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 KRT18P55-202ENST00000578578 1546 ntBASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 COX5BP2-201ENST00000392354 334 ntBASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 AL160237.2-201ENST00000556165 472 ntBASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 AC008608.2-201ENST00000606089 416 ntBASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VAT1LQ9HCJ6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VAT1LQ9HCJ6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.52■□□□□ 0.88
VAT1LQ9HCJ6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
VAT1LQ9HCJ6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VAT1LQ9HCJ6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VAT1LQ9HCJ6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.52■□□□□ 0.88
VAT1LQ9HCJ6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VAT1LQ9HCJ6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
VAT1LQ9HCJ6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VAT1LQ9HCJ6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms