Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC011558.1-201ENST00000623459 338 ntBASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 AL137013.1-201ENST00000432946 1228 ntBASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 BX664615.1-201ENST00000443558 458 ntBASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 AC005363.2-201ENST00000618631 242 ntBASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 AC133561.5-201ENST00000635547 218 ntBASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.06■□□□□ 0.32
LRTM1Q9HBL6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 AC113347.1-201ENST00000413321 391 ntBASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 YBX1P2-201ENST00000489612 999 ntBASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 AC112698.1-201ENST00000510299 916 ntBASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 AC139887.4-201ENST00000607877 719 ntBASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.05■□□□□ 0.32
LRTM1Q9HBL6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 PCDHA12-202ENST00000613593 2588 ntBASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRTM1Q9HBL6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms