Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 AKR1C7P-201ENST00000305623 895 ntBASIC21■□□□□ 0.95
NBPF3Q9H094 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 FAM220CP-201ENST00000395253 831 ntBASIC21■□□□□ 0.95
NBPF3Q9H094 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21■□□□□ 0.95
NBPF3Q9H094 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21■□□□□ 0.95
NBPF3Q9H094 POM121L3P-201ENST00000419331 1163 ntBASIC21■□□□□ 0.95
NBPF3Q9H094 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NBPF3Q9H094 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21■□□□□ 0.95
NBPF3Q9H094 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21■□□□□ 0.95
NBPF3Q9H094 SIRPAP1-201ENST00000448467 1770 ntBASIC21■□□□□ 0.95
NBPF3Q9H094 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF3Q9H094 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF3Q9H094 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF3Q9H094 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF3Q9H094 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF3Q9H094 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF3Q9H094 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF3Q9H094 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF3Q9H094 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NBPF3Q9H094 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NBPF3Q9H094 LINC00304-203ENST00000565008 1864 ntBASIC20.98■□□□□ 0.95
NBPF3Q9H094 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 AL355312.1-201ENST00000407115 2176 ntBASIC20.98■□□□□ 0.95
NBPF3Q9H094 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 REXO1L6P-202ENST00000619970 1078 ntBASIC20.98■□□□□ 0.95
NBPF3Q9H094 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NBPF3Q9H094 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.98■□□□□ 0.95
NBPF3Q9H094 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 AC122714.2-201ENST00000502787 707 ntBASIC20.97■□□□□ 0.95
NBPF3Q9H094 RNA5SP419-201ENST00000515908 135 ntBASIC20.97■□□□□ 0.95
NBPF3Q9H094 SLC25A1P1-201ENST00000528351 927 ntBASIC20.97■□□□□ 0.95
NBPF3Q9H094 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 AL773604.1-201ENST00000617417 272 ntBASIC20.97■□□□□ 0.95
NBPF3Q9H094 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
NBPF3Q9H094 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NBPF3Q9H094 AL049757.1-201ENST00000616842 1596 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms