Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC4.8□□□□□ -1.64
LCE3DQ9BYE3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AC008741.2-201ENST00000612792 3115 ntBASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AC106886.4-201ENST00000623557 2502 ntBASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AC016769.1-201ENST00000409132 1010 ntBASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ABHD17AP6-201ENST00000458502 1044 ntBASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 KRT18P61-201ENST00000585825 1298 ntBASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AL139246.5-201ENST00000606645 996 ntBASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AL121832.2-201ENST00000610979 668 ntBASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms