Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 TSPY19P-201ENST00000418461 509 ntBASIC12.36□□□□□ -0.43
UPK3BQ9BT76 POM121L3P-201ENST00000419331 1163 ntBASIC12.36□□□□□ -0.43
UPK3BQ9BT76 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 TSPY18P-201ENST00000441642 509 ntBASIC12.36□□□□□ -0.43
UPK3BQ9BT76 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 LINC01711-201ENST00000598340 967 ntBASIC12.36□□□□□ -0.43
UPK3BQ9BT76 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 AL138781.2-201ENST00000617896 1843 ntBASIC12.36□□□□□ -0.43
UPK3BQ9BT76 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 LINC00167-201ENST00000530583 1419 ntBASIC12.36□□□□□ -0.43
UPK3BQ9BT76 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK3BQ9BT76 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 AC068472.1-201ENST00000474589 881 ntBASIC12.35□□□□□ -0.43
UPK3BQ9BT76 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 AC012313.10-201ENST00000623509 926 ntBASIC12.35□□□□□ -0.43
UPK3BQ9BT76 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 AC046158.3-201ENST00000624947 2558 ntBASIC12.35□□□□□ -0.43
UPK3BQ9BT76 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 NSUN5P1-202ENST00000421140 1535 ntBASIC12.35□□□□□ -0.43
UPK3BQ9BT76 NSUN5P2-203ENST00000457352 1529 ntBASIC12.35□□□□□ -0.43
UPK3BQ9BT76 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 AC009053.2-201ENST00000563701 2365 ntBASIC12.35□□□□□ -0.43
UPK3BQ9BT76 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 AL390961.4-201ENST00000623958 2535 ntBASIC12.35□□□□□ -0.43
UPK3BQ9BT76 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
UPK3BQ9BT76 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms