Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 TP73-AS1-210ENST00000637775 1455 ntBASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 COX5BP2-201ENST00000392354 334 ntBASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 BNIP3P18-201ENST00000593976 575 ntBASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 AL121772.3-201ENST00000610840 674 ntBASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.45■□□□□ 0.38
CCM2Q9BSQ5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 KRT16P4-201ENST00000453883 522 ntBASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 AC096582.2-201ENST00000510860 516 ntBASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 AC011467.2-201ENST00000598425 242 ntBASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.44■□□□□ 0.38
CCM2Q9BSQ5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 FAM220CP-201ENST00000395253 831 ntBASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms