Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.81■□□□□ 0.44
NDNQ99608 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.81■□□□□ 0.44
NDNQ99608 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NDNQ99608 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NDNQ99608 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.81■□□□□ 0.44
NDNQ99608 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.81■□□□□ 0.44
NDNQ99608 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.81■□□□□ 0.44
NDNQ99608 KRT18P38-201ENST00000449496 1282 ntBASIC17.81■□□□□ 0.44
NDNQ99608 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.81■□□□□ 0.44
NDNQ99608 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.81■□□□□ 0.44
NDNQ99608 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.81■□□□□ 0.44
NDNQ99608 AC004263.2-201ENST00000617183 678 ntBASIC17.81■□□□□ 0.44
NDNQ99608 AC006011.2-201ENST00000621313 1158 ntBASIC17.81■□□□□ 0.44
NDNQ99608 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.81■□□□□ 0.44
NDNQ99608 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NDNQ99608 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDNQ99608 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NDNQ99608 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.81■□□□□ 0.44
NDNQ99608 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.81■□□□□ 0.44
NDNQ99608 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NDNQ99608 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.8■□□□□ 0.44
NDNQ99608 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.8■□□□□ 0.44
NDNQ99608 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.8■□□□□ 0.44
NDNQ99608 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.8■□□□□ 0.44
NDNQ99608 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.8■□□□□ 0.44
NDNQ99608 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NDNQ99608 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
NDNQ99608 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NDNQ99608 HLA-F-220ENST00000434407 884 ntBASIC17.8■□□□□ 0.44
NDNQ99608 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 AL359075.1-203ENST00000462729 1002 ntBASIC17.8■□□□□ 0.44
NDNQ99608 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.8■□□□□ 0.44
NDNQ99608 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.8■□□□□ 0.44
NDNQ99608 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.8■□□□□ 0.44
NDNQ99608 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.8■□□□□ 0.44
NDNQ99608 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.8■□□□□ 0.44
NDNQ99608 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
NDNQ99608 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.8■□□□□ 0.44
NDNQ99608 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDNQ99608 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
NDNQ99608 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.8■□□□□ 0.44
NDNQ99608 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 AC009949.1-201ENST00000623048 1830 ntBASIC17.79■□□□□ 0.44
NDNQ99608 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NDNQ99608 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
NDNQ99608 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NDNQ99608 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.79■□□□□ 0.44
NDNQ99608 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NDNQ99608 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.79■□□□□ 0.44
NDNQ99608 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.79■□□□□ 0.44
NDNQ99608 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
NDNQ99608 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 KRT89P-201ENST00000620027 1478 ntBASIC17.79■□□□□ 0.44
NDNQ99608 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms