Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
TRGV9Q99603 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRGV9Q99603 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRGV9Q99603 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.84□□□□□ -0.19
TRGV9Q99603 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRGV9Q99603 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.84□□□□□ -0.19
TRGV9Q99603 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRGV9Q99603 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRGV9Q99603 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRGV9Q99603 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRGV9Q99603 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.84□□□□□ -0.19
TRGV9Q99603 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRGV9Q99603 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRGV9Q99603 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
TRGV9Q99603 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRGV9Q99603 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRGV9Q99603 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRGV9Q99603 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TRGV9Q99603 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRGV9Q99603 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.83□□□□□ -0.2
TRGV9Q99603 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
TRGV9Q99603 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRGV9Q99603 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.83□□□□□ -0.2
TRGV9Q99603 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.83□□□□□ -0.2
TRGV9Q99603 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.83□□□□□ -0.2
TRGV9Q99603 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRGV9Q99603 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.83□□□□□ -0.2
TRGV9Q99603 MIR4497-201ENST00000583208 89 ntBASIC13.83□□□□□ -0.2
TRGV9Q99603 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.83□□□□□ -0.2
TRGV9Q99603 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.83□□□□□ -0.2
TRGV9Q99603 AC009154.2-201ENST00000621177 724 ntBASIC13.83□□□□□ -0.2
TRGV9Q99603 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRGV9Q99603 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRGV9Q99603 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRGV9Q99603 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
TRGV9Q99603 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRGV9Q99603 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 AC106820.2-201ENST00000563775 3264 ntBASIC13.82□□□□□ -0.2
TRGV9Q99603 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRGV9Q99603 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TRGV9Q99603 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.82□□□□□ -0.2
TRGV9Q99603 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRGV9Q99603 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRGV9Q99603 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.82□□□□□ -0.2
TRGV9Q99603 AC005104.2-201ENST00000427818 678 ntBASIC13.82□□□□□ -0.2
TRGV9Q99603 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.82□□□□□ -0.2
TRGV9Q99603 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.82□□□□□ -0.2
TRGV9Q99603 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.82□□□□□ -0.2
TRGV9Q99603 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.82□□□□□ -0.2
TRGV9Q99603 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.82□□□□□ -0.2
TRGV9Q99603 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.82□□□□□ -0.2
TRGV9Q99603 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRGV9Q99603 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.82□□□□□ -0.2
TRGV9Q99603 AC141257.4-201ENST00000634557 245 ntBASIC13.82□□□□□ -0.2
TRGV9Q99603 AC136944.6-201ENST00000634818 245 ntBASIC13.82□□□□□ -0.2
TRGV9Q99603 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRGV9Q99603 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.82□□□□□ -0.2
TRGV9Q99603 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.82□□□□□ -0.2
TRGV9Q99603 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRGV9Q99603 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV9Q99603 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms