Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 LINC01238-205ENST00000567549 1107 ntBASIC14.67□□□□□ -0.06
S1PR3Q99500 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
S1PR3Q99500 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
S1PR3Q99500 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
S1PR3Q99500 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
S1PR3Q99500 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
S1PR3Q99500 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.67□□□□□ -0.06
S1PR3Q99500 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
S1PR3Q99500 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.67□□□□□ -0.06
S1PR3Q99500 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
S1PR3Q99500 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
S1PR3Q99500 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.67□□□□□ -0.06
S1PR3Q99500 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
S1PR3Q99500 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
S1PR3Q99500 AL391807.1-203ENST00000604392 2365 ntBASIC14.67□□□□□ -0.06
S1PR3Q99500 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
S1PR3Q99500 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
S1PR3Q99500 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.66□□□□□ -0.06
S1PR3Q99500 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.66□□□□□ -0.06
S1PR3Q99500 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.66□□□□□ -0.06
S1PR3Q99500 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.66□□□□□ -0.06
S1PR3Q99500 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.66□□□□□ -0.06
S1PR3Q99500 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
S1PR3Q99500 AC063952.2-201ENST00000498792 1227 ntBASIC14.66□□□□□ -0.06
S1PR3Q99500 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.66□□□□□ -0.06
S1PR3Q99500 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.66□□□□□ -0.06
S1PR3Q99500 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
S1PR3Q99500 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
S1PR3Q99500 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
S1PR3Q99500 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
S1PR3Q99500 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
S1PR3Q99500 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.66□□□□□ -0.06
S1PR3Q99500 LINC00167-201ENST00000530583 1419 ntBASIC14.66□□□□□ -0.06
S1PR3Q99500 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.66□□□□□ -0.06
S1PR3Q99500 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
S1PR3Q99500 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
S1PR3Q99500 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.65□□□□□ -0.06
S1PR3Q99500 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
S1PR3Q99500 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.65□□□□□ -0.06
S1PR3Q99500 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.65□□□□□ -0.06
S1PR3Q99500 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.65□□□□□ -0.06
S1PR3Q99500 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.65□□□□□ -0.06
S1PR3Q99500 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 KRT18P65-201ENST00000439811 1286 ntBASIC14.65□□□□□ -0.06
S1PR3Q99500 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.65□□□□□ -0.06
S1PR3Q99500 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.65□□□□□ -0.06
S1PR3Q99500 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.65□□□□□ -0.06
S1PR3Q99500 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.65□□□□□ -0.06
S1PR3Q99500 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.65□□□□□ -0.06
S1PR3Q99500 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
S1PR3Q99500 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
S1PR3Q99500 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.65□□□□□ -0.06
S1PR3Q99500 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.65□□□□□ -0.06
S1PR3Q99500 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
S1PR3Q99500 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
S1PR3Q99500 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
S1PR3Q99500 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
S1PR3Q99500 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
S1PR3Q99500 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms