Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC098818.2-201ENST00000564925 2320 ntBASIC15.86■□□□□ 0.13
SPENQ96T58 AP000974.1-201ENST00000623909 2387 ntBASIC15.86■□□□□ 0.13
SPENQ96T58 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.86■□□□□ 0.13
SPENQ96T58 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPENQ96T58 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.86■□□□□ 0.13
SPENQ96T58 AL035252.4-201ENST00000624174 288 ntBASIC15.86■□□□□ 0.13
SPENQ96T58 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SPENQ96T58 AL031598.1-201ENST00000561511 1773 ntBASIC15.85■□□□□ 0.13
SPENQ96T58 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.85■□□□□ 0.13
SPENQ96T58 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.85■□□□□ 0.13
SPENQ96T58 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPENQ96T58 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPENQ96T58 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPENQ96T58 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SPENQ96T58 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.85■□□□□ 0.13
SPENQ96T58 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.85■□□□□ 0.13
SPENQ96T58 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SPENQ96T58 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPENQ96T58 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.85■□□□□ 0.13
SPENQ96T58 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.85■□□□□ 0.13
SPENQ96T58 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.85■□□□□ 0.13
SPENQ96T58 GMCL1P1-201ENST00000463439 1581 ntBASIC15.85■□□□□ 0.13
SPENQ96T58 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SPENQ96T58 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.85■□□□□ 0.13
SPENQ96T58 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SPENQ96T58 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.85■□□□□ 0.13
SPENQ96T58 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SPENQ96T58 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SPENQ96T58 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.85■□□□□ 0.13
SPENQ96T58 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SPENQ96T58 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.85■□□□□ 0.13
SPENQ96T58 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPENQ96T58 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.84■□□□□ 0.13
SPENQ96T58 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.84■□□□□ 0.13
SPENQ96T58 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.84■□□□□ 0.13
SPENQ96T58 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPENQ96T58 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.84■□□□□ 0.13
SPENQ96T58 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.84■□□□□ 0.13
SPENQ96T58 AC004790.2-201ENST00000623588 572 ntBASIC15.84■□□□□ 0.13
SPENQ96T58 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.84■□□□□ 0.13
SPENQ96T58 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.84■□□□□ 0.13
SPENQ96T58 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SPENQ96T58 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SPENQ96T58 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPENQ96T58 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.84■□□□□ 0.13
SPENQ96T58 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.84■□□□□ 0.13
SPENQ96T58 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPENQ96T58 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.84■□□□□ 0.13
SPENQ96T58 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPENQ96T58 GNAS-203ENST00000306120 1878 ntBASIC15.84■□□□□ 0.13
SPENQ96T58 AC087289.5-201ENST00000586076 3175 ntBASIC15.84■□□□□ 0.13
SPENQ96T58 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.84■□□□□ 0.13
SPENQ96T58 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPENQ96T58 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPENQ96T58 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPENQ96T58 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.84■□□□□ 0.13
SPENQ96T58 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.84■□□□□ 0.13
SPENQ96T58 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.84■□□□□ 0.13
SPENQ96T58 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.84■□□□□ 0.13
SPENQ96T58 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPENQ96T58 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SPENQ96T58 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPENQ96T58 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SPENQ96T58 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.83■□□□□ 0.13
SPENQ96T58 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SPENQ96T58 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.83■□□□□ 0.13
SPENQ96T58 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPENQ96T58 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPENQ96T58 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPENQ96T58 FAM58DP-201ENST00000428076 619 ntBASIC15.83■□□□□ 0.13
SPENQ96T58 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SPENQ96T58 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.83■□□□□ 0.13
SPENQ96T58 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPENQ96T58 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SPENQ96T58 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.83■□□□□ 0.12
SPENQ96T58 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.83■□□□□ 0.12
SPENQ96T58 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.83■□□□□ 0.12
SPENQ96T58 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.83■□□□□ 0.12
SPENQ96T58 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.83■□□□□ 0.12
SPENQ96T58 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SPENQ96T58 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.83■□□□□ 0.12
SPENQ96T58 AC025580.3-201ENST00000617932 1424 ntBASIC15.83■□□□□ 0.12
SPENQ96T58 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SPENQ96T58 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.83■□□□□ 0.12
SPENQ96T58 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.83■□□□□ 0.12
SPENQ96T58 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.83■□□□□ 0.12
SPENQ96T58 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SPENQ96T58 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPENQ96T58 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms