Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 AL049757.1-201ENST00000616842 1596 ntBASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP1Q96SZ6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 SLC25A6P4-201ENST00000586535 553 ntBASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 AC073592.5-201ENST00000624854 528 ntBASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 SIGLEC16-201ENST00000599858 1437 ntBASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 AC079776.2-201ENST00000641154 1609 ntBASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP1Q96SZ6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 AC003669.1-201ENST00000334569 611 ntBASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 SIRPAP1-201ENST00000448467 1770 ntBASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP1Q96SZ6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 AC090340.1-201ENST00000620778 4980 ntBASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 AC005104.2-201ENST00000427818 678 ntBASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms