Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 AL138781.2-201ENST00000617896 1843 ntBASIC13.79□□□□□ -0.2
DUX3Q96PT4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 AC135776.1-201ENST00000319817 2481 ntBASIC13.79□□□□□ -0.2
DUX3Q96PT4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.79□□□□□ -0.2
DUX3Q96PT4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 AP000347.1-202ENST00000435868 847 ntBASIC13.79□□□□□ -0.2
DUX3Q96PT4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 SLC25A6P4-201ENST00000586535 553 ntBASIC13.78□□□□□ -0.2
DUX3Q96PT4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 AC008608.2-201ENST00000606089 416 ntBASIC13.78□□□□□ -0.2
DUX3Q96PT4 AL138831.2-201ENST00000606564 490 ntBASIC13.78□□□□□ -0.2
DUX3Q96PT4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 AC125634.1-201ENST00000438758 1403 ntBASIC13.78□□□□□ -0.2
DUX3Q96PT4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX3Q96PT4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.78□□□□□ -0.2
DUX3Q96PT4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms