Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASD1Q96PB1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.81■□□□□ 0.6
CASD1Q96PB1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASD1Q96PB1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASD1Q96PB1 HMGN1P19-201ENST00000436976 333 ntBASIC18.81■□□□□ 0.6
CASD1Q96PB1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.81■□□□□ 0.6
CASD1Q96PB1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.81■□□□□ 0.6
CASD1Q96PB1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
CASD1Q96PB1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.81■□□□□ 0.6
CASD1Q96PB1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CASD1Q96PB1 AL355385.1-201ENST00000606123 409 ntBASIC18.81■□□□□ 0.6
CASD1Q96PB1 AC010654.1-201ENST00000615722 808 ntBASIC18.81■□□□□ 0.6
CASD1Q96PB1 C20orf181-201ENST00000623918 480 ntBASIC18.81■□□□□ 0.6
CASD1Q96PB1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASD1Q96PB1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASD1Q96PB1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASD1Q96PB1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASD1Q96PB1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASD1Q96PB1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CASD1Q96PB1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CASD1Q96PB1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.81■□□□□ 0.6
CASD1Q96PB1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 AP002414.1-201ENST00000391405 1147 ntBASIC18.8■□□□□ 0.6
CASD1Q96PB1 MRPL20P1-201ENST00000400819 433 ntBASIC18.8■□□□□ 0.6
CASD1Q96PB1 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 OR7E47P-204ENST00000575924 449 ntBASIC18.8■□□□□ 0.6
CASD1Q96PB1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.8■□□□□ 0.6
CASD1Q96PB1 BX323043.1-201ENST00000641006 1765 ntBASIC18.8■□□□□ 0.6
CASD1Q96PB1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASD1Q96PB1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASD1Q96PB1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASD1Q96PB1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASD1Q96PB1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASD1Q96PB1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASD1Q96PB1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASD1Q96PB1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASD1Q96PB1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASD1Q96PB1 AC098818.2-201ENST00000564925 2320 ntBASIC18.79■□□□□ 0.6
CASD1Q96PB1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASD1Q96PB1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASD1Q96PB1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CASD1Q96PB1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 HTR5BP-201ENST00000430851 1154 ntBASIC18.78■□□□□ 0.6
CASD1Q96PB1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 AC010507.1-201ENST00000633895 436 ntBASIC18.78■□□□□ 0.6
CASD1Q96PB1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms