Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 AC025580.3-201ENST00000617932 1424 ntBASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 AL139400.1-201ENST00000366220 510 ntBASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 AC091812.2-201ENST00000619081 385 ntBASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NECTIN4Q96NY8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.27■□□□□ 0.51
NECTIN4Q96NY8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NECTIN4Q96NY8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.27■□□□□ 0.51
NECTIN4Q96NY8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.27■□□□□ 0.51
NECTIN4Q96NY8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NECTIN4Q96NY8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NECTIN4Q96NY8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NECTIN4Q96NY8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 AC005082.1-201ENST00000413042 2259 ntBASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 AC018445.3-201ENST00000624177 1945 ntBASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 PTCHD3P3-201ENST00000403073 906 ntBASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 AC092474.2-201ENST00000424288 719 ntBASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN4Q96NY8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 HLA-J-203ENST00000494367 1087 ntBASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 AC093512.1-201ENST00000617969 520 ntBASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 ANO7L1-203ENST00000602586 1720 ntBASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN4Q96NY8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.24■□□□□ 0.51
NECTIN4Q96NY8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms