Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 AC067852.2-201ENST00000590513 2313 ntBASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 TSPY19P-201ENST00000418461 509 ntBASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 TSPY18P-201ENST00000441642 509 ntBASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 KRT16P4-201ENST00000453883 522 ntBASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 KRT18P31-201ENST00000506277 1292 ntBASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 AL732292.2-201ENST00000609649 430 ntBASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.73■□□□□ 0.27
PTCHD1Q96NR3 AC026471.1-201ENST00000564629 3026 ntBASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 AC097374.2-201ENST00000618617 1306 ntBASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTCHD1Q96NR3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 RCN1P2-201ENST00000398357 915 ntBASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.71■□□□□ 0.27
PTCHD1Q96NR3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms