Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.14■□□□□ 0.65
ALPK3Q96L96 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 AC097493.3-201ENST00000509725 367 ntBASIC19.14■□□□□ 0.65
ALPK3Q96L96 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.14■□□□□ 0.65
ALPK3Q96L96 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALPK3Q96L96 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 GNAS-203ENST00000306120 1878 ntBASIC19.13■□□□□ 0.65
ALPK3Q96L96 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 IGHV3-42-201ENST00000520410 361 ntBASIC19.13■□□□□ 0.65
ALPK3Q96L96 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALPK3Q96L96 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ALPK3Q96L96 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ALPK3Q96L96 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 AC100803.2-201ENST00000562459 1963 ntBASIC19.12■□□□□ 0.65
ALPK3Q96L96 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 GMCL1P1-201ENST00000463439 1581 ntBASIC19.12■□□□□ 0.65
ALPK3Q96L96 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ALPK3Q96L96 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALPK3Q96L96 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.12■□□□□ 0.65
ALPK3Q96L96 AFG3L1P-217ENST00000557444 2447 ntBASIC19.11■□□□□ 0.65
ALPK3Q96L96 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ALPK3Q96L96 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALPK3Q96L96 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ALPK3Q96L96 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ALPK3Q96L96 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALPK3Q96L96 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.11■□□□□ 0.65
ALPK3Q96L96 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ALPK3Q96L96 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALPK3Q96L96 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALPK3Q96L96 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ALPK3Q96L96 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.11■□□□□ 0.65
ALPK3Q96L96 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
ALPK3Q96L96 RBPMS2P1-201ENST00000437762 623 ntBASIC19.11■□□□□ 0.65
ALPK3Q96L96 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.11■□□□□ 0.65
ALPK3Q96L96 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.11■□□□□ 0.65
ALPK3Q96L96 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.11■□□□□ 0.65
ALPK3Q96L96 MIR6080-201ENST00000617359 66 ntBASIC19.11■□□□□ 0.65
ALPK3Q96L96 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALPK3Q96L96 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ALPK3Q96L96 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ALPK3Q96L96 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ALPK3Q96L96 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALPK3Q96L96 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms