Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 KRT8P47-201ENST00000604727 1398 ntBASIC19.09■□□□□ 0.65
LRCH3Q96II8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 AL353135.1-201ENST00000606729 504 ntBASIC19.09■□□□□ 0.65
LRCH3Q96II8 AL662799.1-202ENST00000614205 422 ntBASIC19.09■□□□□ 0.65
LRCH3Q96II8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 AL390754.1-201ENST00000619088 582 ntBASIC19.09■□□□□ 0.65
LRCH3Q96II8 AC068587.9-201ENST00000641814 219 ntBASIC19.09■□□□□ 0.65
LRCH3Q96II8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
LRCH3Q96II8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRCH3Q96II8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH3Q96II8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.08■□□□□ 0.65
LRCH3Q96II8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH3Q96II8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH3Q96II8 FO538757.1-201ENST00000623083 1397 ntBASIC19.08■□□□□ 0.65
LRCH3Q96II8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH3Q96II8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.08■□□□□ 0.65
LRCH3Q96II8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH3Q96II8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH3Q96II8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.08■□□□□ 0.65
LRCH3Q96II8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.08■□□□□ 0.65
LRCH3Q96II8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LRCH3Q96II8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH3Q96II8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.08■□□□□ 0.65
LRCH3Q96II8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH3Q96II8 TUBB3P1-201ENST00000405796 1332 ntBASIC19.08■□□□□ 0.65
LRCH3Q96II8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.08■□□□□ 0.65
LRCH3Q96II8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRCH3Q96II8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH3Q96II8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH3Q96II8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH3Q96II8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 AC007967.3-201ENST00000434308 558 ntBASIC19.08■□□□□ 0.64
LRCH3Q96II8 U91328.1-201ENST00000437528 223 ntBASIC19.08■□□□□ 0.64
LRCH3Q96II8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH3Q96II8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH3Q96II8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH3Q96II8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.08■□□□□ 0.64
LRCH3Q96II8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRCH3Q96II8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 KLF2P3-201ENST00000451977 1087 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms