Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 MIR770-201ENST00000390219 98 ntBASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 KLF4P1-201ENST00000412782 1185 ntBASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 AL031432.2-201ENST00000566714 459 ntBASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 AL928711.1-201ENST00000570165 459 ntBASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 AC004877.2-201ENST00000623941 599 ntBASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 AC087289.5-201ENST00000586076 3175 ntBASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRNP40Q96DI7 AC093010.1-201ENST00000473625 1624 ntBASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 PHGDH-209ENST00000641074 1780 ntBASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 IGLL3P-201ENST00000412472 434 ntBASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 PDPK2P-202ENST00000562415 1191 ntBASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 AC010654.1-201ENST00000615722 808 ntBASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 AC120498.9-201ENST00000339021 3867 ntBASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SNRNP40Q96DI7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 AC003669.1-201ENST00000334569 611 ntBASIC15.85■□□□□ 0.13
SNRNP40Q96DI7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms