Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.71■□□□□ 0.42
ECHDC3Q96DC8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 AL160237.2-201ENST00000556165 472 ntBASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 AC109462.3-201ENST00000573934 613 ntBASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 LINC01451-201ENST00000623792 534 ntBASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 AC132938.5-201ENST00000624980 1813 ntBASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.7■□□□□ 0.42
ECHDC3Q96DC8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 LINC00304-203ENST00000565008 1864 ntBASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 TP73-AS1-207ENST00000624167 988 ntBASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 AC073592.5-201ENST00000624854 528 ntBASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 SIGLEC16-201ENST00000599858 1437 ntBASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 AC079776.2-201ENST00000641154 1609 ntBASIC17.69■□□□□ 0.42
ECHDC3Q96DC8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 NOC2LP2-201ENST00000407594 1944 ntBASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 AP002469.2-201ENST00000531724 424 ntBASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 STK25P1-201ENST00000585406 838 ntBASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 AC007613.1-201ENST00000572811 2597 ntBASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ECHDC3Q96DC8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms