Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHCHD1Q96BP2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHCHD1Q96BP2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHCHD1Q96BP2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.92□□□□□ -0.34
CHCHD1Q96BP2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.92□□□□□ -0.34
CHCHD1Q96BP2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.92□□□□□ -0.34
CHCHD1Q96BP2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CHCHD1Q96BP2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHCHD1Q96BP2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.92□□□□□ -0.34
CHCHD1Q96BP2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CHCHD1Q96BP2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 AC009102.3-201ENST00000623118 1491 ntBASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 SDHAP2-201ENST00000455183 2001 ntBASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CHCHD1Q96BP2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 AK1-201ENST00000223836 736 ntTSL 3 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 LSM12P1-201ENST00000411836 588 ntBASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.9□□□□□ -0.34
CHCHD1Q96BP2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms