Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SH3KBP1Q96B97 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.59■□□□□ 0.41
SH3KBP1Q96B97 AC068880.1-201ENST00000507289 2297 ntBASIC17.59■□□□□ 0.41
SH3KBP1Q96B97 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SH3KBP1Q96B97 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SH3KBP1Q96B97 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 NSUN5P1-202ENST00000421140 1535 ntBASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 NSUN5P2-203ENST00000457352 1529 ntBASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SH3KBP1Q96B97 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 KRT16P4-201ENST00000453883 522 ntBASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH3KBP1Q96B97 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 AL096828.2-201ENST00000567259 1965 ntBASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 AC026396.1-201ENST00000419388 421 ntBASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 AC138894.3-201ENST00000603787 634 ntBASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 IFNL4P1-201ENST00000607083 540 ntBASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 REXO1L9P-201ENST00000604264 2108 ntBASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SH3KBP1Q96B97 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 LTB4R2-202ENST00000528054 3092 ntBASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 LINC00602-201ENST00000629776 2065 ntBASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SH3KBP1Q96B97 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms