Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN23Q96B33 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN23Q96B33 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN23Q96B33 AC092919.2-201ENST00000623631 1645 ntBASIC17.58■□□□□ 0.4
CLDN23Q96B33 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLDN23Q96B33 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 BX276092.7-203ENST00000637198 1536 ntBASIC17.57■□□□□ 0.4
CLDN23Q96B33 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 DUX4L27-201ENST00000554796 1261 ntBASIC17.57■□□□□ 0.4
CLDN23Q96B33 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 AC116407.2-201ENST00000613639 860 ntBASIC17.57■□□□□ 0.4
CLDN23Q96B33 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CLDN23Q96B33 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN23Q96B33 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 AL590787.1-201ENST00000568856 1315 ntBASIC17.56■□□□□ 0.4
CLDN23Q96B33 AC063926.2-201ENST00000623766 1308 ntBASIC17.56■□□□□ 0.4
CLDN23Q96B33 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.56■□□□□ 0.4
CLDN23Q96B33 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 AC015922.1-201ENST00000421102 1152 ntBASIC17.56■□□□□ 0.4
CLDN23Q96B33 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 ACTL9-202ENST00000612068 1252 ntBASIC17.56■□□□□ 0.4
CLDN23Q96B33 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN23Q96B33 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN23Q96B33 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN23Q96B33 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CLDN23Q96B33 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN23Q96B33 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 AC002056.1-201ENST00000395613 760 ntBASIC17.55■□□□□ 0.4
CLDN23Q96B33 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN23Q96B33 ACTG1P4-201ENST00000425123 1122 ntBASIC17.55■□□□□ 0.4
CLDN23Q96B33 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN23Q96B33 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN23Q96B33 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 AC026120.1-201ENST00000611536 926 ntBASIC17.55■□□□□ 0.4
CLDN23Q96B33 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN23Q96B33 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN23Q96B33 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms