Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.93■□□□□ 0.14
CPNE4Q96A23 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE4Q96A23 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 AC100803.2-201ENST00000562459 1963 ntBASIC15.93■□□□□ 0.14
CPNE4Q96A23 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CPNE4Q96A23 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 TSPY19P-201ENST00000418461 509 ntBASIC15.92■□□□□ 0.14
CPNE4Q96A23 SLC25A6P5-201ENST00000435663 894 ntBASIC15.92■□□□□ 0.14
CPNE4Q96A23 TSPY18P-201ENST00000441642 509 ntBASIC15.92■□□□□ 0.14
CPNE4Q96A23 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 AC091304.2-201ENST00000564639 760 ntBASIC15.92■□□□□ 0.14
CPNE4Q96A23 AC011467.2-201ENST00000598425 242 ntBASIC15.92■□□□□ 0.14
CPNE4Q96A23 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.92■□□□□ 0.14
CPNE4Q96A23 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CPNE4Q96A23 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE4Q96A23 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 FAM220CP-201ENST00000395253 831 ntBASIC15.91■□□□□ 0.14
CPNE4Q96A23 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 AC007967.3-201ENST00000434308 558 ntBASIC15.91■□□□□ 0.14
CPNE4Q96A23 DUSP5P1-201ENST00000441325 1139 ntBASIC15.91■□□□□ 0.14
CPNE4Q96A23 KRT18P31-201ENST00000506277 1292 ntBASIC15.91■□□□□ 0.14
CPNE4Q96A23 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms